| Protein ZmIAA25 | |
|---|---|
|
ZmIAA25 is a protein in the Aux/IAA family.
|
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| Information | |
| Coreg Name: | ZmIAA25 |
| Species: | Maize |
| Coreg Family: | Aux/IAA |
| Gene Name(Synonym): | IAA32 |
| Uniprot ID: | B6SJA9 |
| Subgenome: | 1 |
Protein ZmIAA25
ZmIAA25 is a protein in the Aux/IAA family.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF02309 | |
| Zm00001eb301590_T001 |  |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d018973 | DAPseq |  |
sequence | fimo | position |
| Zm00001d018973 | DAPseq |  |
sequence | fimo | position |
| Zm00001d018973 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d018973 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmIAA25 is the regulator
Interactions where ZmIAA25 is the target
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Zm00001eb301590_T001 from maize genome v5
Amino Acid Sequence
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MELDADNLSATELRLGLPGTSSSSSDDWQKKPSPSVGAKRALDDGTKSEASGTSPAARDLDFDHDHDTAAPPKAQVVGWP
PVRAYRKNTFQAAAAAKKVEQKQKQQQQGGLYVKVSMDGAPYLRKVDLRMYKGYRELREALDALFTNSFSAAAEGGGDHH
QHAIAYEDKDGDLMLAGDVPWDMFISSCKKLRIMKGSASEAR
MELDADNLSATELRLGLPGTSSSSSDDWQKKPSPSVGAKRALDDGTKSEASGTSPAARDLDFDHDHDTAAPPKAQVVGWP
PVRAYRKNTFQAAAAAKKVEQKQKQQQQGGLYVKVSMDGAPYLRKVDLRMYKGYRELREALDALFTNSFSAAAEGGGDHH
QHAIAYEDKDGDLMLAGDVPWDMFISSCKKLRIMKGSASEAR
MELDADNLSATELRLGLPGTSSSSSDDWQKKPSPSVGAKRALDDGTKSEASGTSPAARDLDFDHDHDTAAPPKAQVVGWP
PVRAYRKNTFQAAAAAKKVEQKQKQQQQGGLYVKVSMDGAPYLRKVDLRMYKGYRELREALDALFTNSFSAAAEGGGDHH
QHAIAYEDKDGDLMLAGDVPWDMFISSCKKLRIMKGSASEAR
MELDADNLSATELRLGLPGTSSSSSDDWQKKPSPSVGAKRALDDGTKSEASGTSPAARDLDFDHDHDTAAPPKAQVVGWP
PVRAYRKNTFQAAAAAKKVEQKQKQQQQGGLYVKVSMDGAPYLRKVDLRMYKGYRELREALDALFTNSFSAAAEGGGDHH
QHAIAYEDKDGDLMLAGDVPWDMFISSCKKLRIMKGSASEAR
MELDADNLSATELRLGLPGTSSSSSDDWQKKPSPSVGAKRALDDGTKSEASGTSPAARDLDFDHDHDTAAPPKAQVVGWP
PVRAYRKNTFQAAAAAKKVEQKQKQQQQGGLYVKVSMDGAPYLRKVDLRMYKGYRELREALDALFTNSFSAAAEGGGDHH
QHAIAYEDKDGDLMLAGDVPWDMFISSCKKLRIMKGSASEAR
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF02309 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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CGGGACACGCGCCTCCGCGCCACCA...
CGGGACACGCGCCTCCGCGCCACCATTTAAAACGCGCCAGCGCCGCGGCGGTGGCGAAAGCCTCGTCGCAACCAGTCAACCACCCTATAAAGCGCGGGGTCTCAGTCTCACCGGCACCTCTTCAATCCCAGTCCCACACAAAGTTTCTCCTCGATCCTCATCTCCTCCCTCTCTCGAGTCAAGAGCAGAGCAGCTACCAAACAAGCTCTCCTTTCGCTTCCGATCCATGGAGCTCGACGCCGACAACCTGAGCGCCACCGAGCTCCGCCTCGGCCTGCCTGGGACCAGCAGCAGCAGCAGCGACGACTGGCAGAAGAAGCCGTCGCCCTCCGTCGGGGCCAAGCGCGCTCTGGACGACGGCACCAAGAGCGAGGCCTCGGGGACCAGCCCGGCCGCCAGAGACCTCGACTTCGACCACGACCACGACACCGCCGCGCCTCCCAAGGCGCAAGTGGTCGGGTGGCCGCCGGTGAGGGCGTACAGGAAGAACACCTTCCAGGCGGCGGCGGCGGCCAAGAAGGTCGAGCAGAAGCAGAAGCAGCAGCAGCAGGGAGGCCTGTACGTGAAGGTGAGCATGGACGGCGCGCCGTACCTCAGGAAGGTGGACCTCCGGATGTACAAGGGGTACAGGGAGCTCAGGGAGGCTCTGGACGCGCTCTTCACCAACTCCTTCTCCGCGGCGGCAGAGGGCGGCGGCGACCACCACCAGCACGCCATCGCCTACGAAGACAAGGACGGCGACCTCATGCTCGCCGGAGACGTGCCCTGGGATATGTTCATCTCTTCGTGCAAGAAGCTCAGGATAATGAAGGGCTCTGCCTCTGAGGCCAGGTGATCGCTGATCCATACATAAACAGAGGCTACAGACACGCCACCTGGGAACGCGGATCCAAGAGCACACACGGATCGTACTTGACGAGGAAGGAGGGAGGAGCAGTGTGGCTTGAGCTCTCCAGTGTTGTACAAAGACATGTTTCTTTCTGAACCCAAAAGGGAGAAAGATGTATGAAGCGTGTATATAAGATCTTAGCTAGCAGTTTGTTTTCATTTGTATGAGCGATCGAAGGCTGTAAAAAATGAAAAAGAAAAAAGAAAAGGGAATGAGAAATTGACTAAAGCTGGTCATTTTTCCTCTCCACAGGCTCAACTCTGTATGAGAAAAAAAAGACATTTTTCCGGTCACTGTGATTTTGCATGATCCCTTCATGTATACTACGCTTGTAAACCAAATGAGCATTTCCCCCATGCGGCAAATCAAGCATCTGCCTTATCCAACAACCCCATCTAGTTTTGGAGTCCAAGAGCTTCATCCTACCCTATACTCTGGCCTGGTAATTCAGAACTCAGATCTGGAGAACTGGACGGCACAACACATGAACATGACGGAAACAGATCTGGAATGGGCTTAAAAACATGATTATTTTTCCCCAAGTACATTTCTCGGAGACAGGCCATGATAAGAAATTAAGGCACAAGGTTGTTTATATTAGTAAAAAAACACACACACACAAAATAGCAAAAGAAAATAACTAAGCAGCAGTAAGACATATAATCACAAGTTTAAGCAATCTATTCAAAAGTTACTGATATTTTTTGTAATGCTAAATAAACATCATTAAGTTAACTATAACAAACCTAACTAGGGATATAAATGTTAATATTTGTTTCCTATAAAAGTTACCAAACCTAACAAAATTCGACTTGCCCAAGCCCTACTACGGTTACGTTCTCTTTTTTTTCTTTCTTTATTTGAGGGAGTAATAGACAACAGCCACCGGCCATTGTTGAAGCTGTAAAGAAGATAAGGCAGCGTCCATGCCTGCCACTCTGCCAGTGCCGGCTGCCGGACAAAGCGGGCATGGACCAAGAGGTGAAAGGGAACCCCGGGGGGAAGAATCCAAACGCACGGAAAGCCACGCACGCTGTCTGCGAGGAGCCGAGCATTTCATGGCAGGATATGCAGGGCGGCATTTCAGAGGACATGATGATACGGTTGGCGCACAGCTTCTGGGAACCCCCCCAGCCCCCAGAAGGTGTGCAGGCAGGGAGGAAGAAGTATCCAGCGAAATGCTGCGGTCAGGAACATGTGGCGGTGGCTAACTGCATCGCCACCTGAAACGAGGAACATATCATATGGAATTGTGTGGAGCAGTGGAGGTGATCATGTTCCTATGGAACTGAATAGAGTGCAGTGGCGACAAGATCAGAGCTGAGAATGTTGCCAGCGTAACAGAAGTG
GRMZM2G115357_T01 from maize genome v3
Amino Acid Sequence
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MDGAPYLRKVDLRMYKGYRELREALDALFTNSFSAAAEGGGDHHQHAIAYEDKDGDLMLAGDVPWE
Nucleotide Sequence
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CCACCCTATAAAGCGCGGGGTCTCA...
CCACCCTATAAAGCGCGGGGTCTCAGTCTCACCGGCACCTCTTCAATCCCAGTCCCACACAAAGTTTCTCCTCGATCCTCATCTCCTCCCTCTCTCGAGTCAAGAGCAGAGCAGCTACCAAACAAGCTCTCCTTTCGCTTCCGATCCATGGAGCTCGACGCCGACAACCTGAGCGCCACCGAGCTCCGCCTCGGCCTGCCTGGGACCAGCAGCAGCAGCAGCGACGACTGGCAGAAGAAGCCGTCGCCCTCCGTCGGGGCCAAGCGCGCTCTGGACGACGGCACCAAGAGCGAGGCCTCGGGGACCAGCCCGGCCGCCAGAGACCTCGACTTCGACCACGACCACGACACCGCCGCGCCTCCCAAGTAAGAACTAGACCCCCCATGTACACGCTCCCAGCTCCCTTCGTAGGCACCGCCTGCATCAAGATTCAATTCAAGAGACAGGGGTGCATGGGCTAACCTGCCTTTTTCGCTTCGTCAGGGCGCAAGTGGTCGGGTGGCCGCCGGTGAGGGCGTACAGGAAGAACACCTTCCAGGCGGCGGCGGCGGCCAAGAAGGTCGAGCAGAAGCAGAAGCAGCAGCAGCAGGGAGGCCTGTACGTGAAGGTGAGCATGGACGGCGCGCCGTACCTCAGGAAGGTGGACCTCCGGATGTACAAGGGGTACAGGGAGCTCAGGGAGGCTCTGGACGCGCTCTTCACCAACTCCTTCTCCGCGGCGGCAGAGGGCGGCGGCGACCACCACCAGCACGCCATCGCCTACGAAGACAAGGACGGCGACCTCATGCTCGCCGGAGACGTGCCCTGGGAGTAAGTACACCGTCGGGTTCGGATCAGCAAGCATGCTGCTCCGTTCTGTGGATCTGAGGATACGTTTGGTGAACAGAAGCCTGATTAATTGTGATTCTTAATTTCACCCCCTTTGCAGTATGTTCATCTCTTCGTGCAAGAAGCTCAGGATAATGAAGGGCTCTGCCTCTGAGGCCAGGTGATCGCTGATCCATACATAAACAGAGGCTACAGACACGCCACCTGGGAACGCGGATCCAAGAGCACACACGGATCGTACTTGACGAGGAAGGAGGGAGGAGCAGTGTGGCTTGAGCTCTCCAGTGTTGTACAAAGACATGTTTCTTTCTGAACCCAAAAGGGAGAAAGATGTATGAAGCGTGTATATAAGATCTTAGCTAGCAGTTTGTTTTCATTTGTATGAGCGATCGAAGGCTGTAAAAAATGAAAAAGAAAAAAGAAAAGGGAATGAGAAATTGACTAAAGCTGGTCATTTTTCCTCTCCACAGGCTCAACTCTGTATGAGAAAAAAAAGACATTTTTCCGGTCA
GRMZM2G115357_T02 from maize genome v3
Amino Acid Sequence
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MELDADNLSATELRLGLPGTSSSSSDDWQKKPSPSVGAKRALDDGTKSEASGTSPAARDLDFDHDHDTAAPPKAQVVGWP
PVRAYRKNTFQAAAAAKKVEQKQKQQQQGGLYVKVSMDGAPYLRKVDLRMYKGYRELREALDALFTNSFSAAAEGGGDHH
QHAIAYEDKDGDLMLAGDVPWDMFISSCKKLRIMKGSASEAR
Nucleotide Sequence
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GCGCGGGGTCTCAGTCTCACCGGCA...
GCGCGGGGTCTCAGTCTCACCGGCACCTCTTCAATCCCAGTCCCACACAAAGTTTCTCCTCGATCCTCATCTCCTCCCTCTCTCGAGTCAAGAGCAGAGCAGCTACCAAACAAGCTCTCCTTTCGCTTCCGATCCATGGAGCTCGACGCCGACAACCTGAGCGCCACCGAGCTCCGCCTCGGCCTGCCTGGGACCAGCAGCAGCAGCAGCGACGACTGGCAGAAGAAGCCGTCGCCCTCCGTCGGGGCCAAGCGCGCTCTGGACGACGGCACCAAGAGCGAGGCCTCGGGGACCAGCCCGGCCGCCAGAGACCTCGACTTCGACCACGACCACGACACCGCCGCGCCTCCCAAGGCGCAAGTGGTCGGGTGGCCGCCGGTGAGGGCGTACAGGAAGAACACCTTCCAGGCGGCGGCGGCGGCCAAGAAGGTCGAGCAGAAGCAGAAGCAGCAGCAGCAGGGAGGCCTGTACGTGAAGGTGAGCATGGACGGCGCGCCGTACCTCAGGAAGGTGGACCTCCGGATGTACAAGGGGTACAGGGAGCTCAGGGAGGCTCTGGACGCGCTCTTCACCAACTCCTTCTCCGCGGCGGCAGAGGGCGGCGGCGACCACCACCAGCACGCCATCGCCTACGAAGACAAGGACGGCGACCTCATGCTCGCCGGAGACGTGCCCTGGGATATGTTCATCTCTTCGTGCAAGAAGCTCAGGATAATGAAGGGCTCTGCCTCTGAGGCCAGGTGATCGCTGATCCATACATAAACAGAGGCTACAGACACGCCACCTGGGAACGCGGATCCAAGAGCACACACGGATCGTACTTGACGAGGAAGGAGGGAGGAGCAGTGTGGCTTGAGCTCTCCAGTGTTGTACAAAGACATGTTTCTTTCTGAACCCAAAAGGGAGAAAGATGTATGAAGCGTGTATATAAGATCTTAGCTAGCAGTTTGTTTTCATTTGTATGAGCGATCGAAGGCTGTAAAAAATGAAAAAGAAAAAAGAAAAGGGAATGAGAAATTGACTAAAGCTGGTCATTTTTCCTCTCCACAGGCTCAACTCTGTATGAGAAAAAAAAGACATTTTTCCGGTCA
GRMZM2G115357_T03 from maize genome v3
Amino Acid Sequence
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MELDADNLSATELRLGLPGTSSSSSDDWQKKPSPSVGAKRALDDGTKSEASGTSPAARDLDFDHDHDTAAPPKAQVVGWP
PVRAYRKNTFQAAAAAKKVEQKQKQQQQGGLYVKVSMDGAPYLRKVDLRMYKGYRELREALDALFTNSFSAAAEGGGDHH
QHAIAYEDKDGDLMLAGDVPWE
Nucleotide Sequence
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CTCAGTCTCACCGGCACCTCTTCAA...
CTCAGTCTCACCGGCACCTCTTCAATCCCAGTCCCACACAAAGTTTCTCCTCGATCCTCATCTCCTCCCTCTCTCGAGTCAAGAGCAGAGCAGCTACCAAACAAGCTCTCCTTTCGCTTCCGATCCATGGAGCTCGACGCCGACAACCTGAGCGCCACCGAGCTCCGCCTCGGCCTGCCTGGGACCAGCAGCAGCAGCAGCGACGACTGGCAGAAGAAGCCGTCGCCCTCCGTCGGGGCCAAGCGCGCTCTGGACGACGGCACCAAGAGCGAGGCCTCGGGGACCAGCCCGGCCGCCAGAGACCTCGACTTCGACCACGACCACGACACCGCCGCGCCTCCCAAGGCGCAAGTGGTCGGGTGGCCGCCGGTGAGGGCGTACAGGAAGAACACCTTCCAGGCGGCGGCGGCGGCCAAGAAGGTCGAGCAGAAGCAGAAGCAGCAGCAGCAGGGAGGCCTGTACGTGAAGGTGAGCATGGACGGCGCGCCGTACCTCAGGAAGGTGGACCTCCGGATGTACAAGGGGTACAGGGAGCTCAGGGAGGCTCTGGACGCGCTCTTCACCAACTCCTTCTCCGCGGCGGCAGAGGGCGGCGGCGACCACCACCAGCACGCCATCGCCTACGAAGACAAGGACGGCGACCTCATGCTCGCCGGAGACGTGCCCTGGGAGTAAGTACACCGTCGGGTTCGGATCAGCAAGCATGCTGCTCCGTTCTGTGGATCTGAGGATACGTTTGGTGAACAGAAGCCTGATTAATTGTGATTCTTAATTTCACCCCCTTTGCAGTATGTTCATCTCTTCGTGCAAGAAGCTCAGGATAATGAAGGGCTCTGCCTCTGAGGCCAGGTGATCGCTGATCCATACATAAACAGAGGCTACAGACACGCCACCTGGGAACGCGGATCCAAGAGCACACACGGATCGTACTTGACGAGGAAGGAGGGAGGAGCAGTGTGGCTTGAGCTCTCCAGTGTTGTACAAAGACATGTTTCTTTCTGAACCCAAAAGGGAGAAAGATGTATGAAGCGTGTATATAAGATCTTAGCTAGCAGTTTGTTTTCATTTGTATGAGCGATCGAAGGCTGTAAAAAATGAAAAAGAAAAAAGAAAAGGGAATGAGAAATTGACTAAAGCTGGTCATTTTTCCTCTCCACAGGCTCAACTCTGTATGAGAAAAAAAAGACATTTTTCCGGTCA
Zm00001d018973_T001 from maize genome v4
Amino Acid Sequence
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MELDADNLSATELRLGLPGTSSSSSDDWQKKPSPSVGAKRALDDGTKSEASGTSPAARDLDFDHDHDTAAPPKAQVVGWP
PVRAYRKNTFQAAAAAKKVEQKQKQQQQGGLYVKVSMDGAPYLRKVDLRMYKGYRELREALDALFTNSFSAAAEGGGDHH
QHAIAYEDKDGDLMLAGDVPWDMFISSCKKLRIMKGSASEAR
Nucleotide Sequence
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GCACCTCTTCAATCCCAGTCCCACA...
GCACCTCTTCAATCCCAGTCCCACACAAAGTTTCTCCTCGATCCTCATCTCCTCCCTCTCTCGAGTCAAGAGCAGAGCAGCTACCAAACAAGCTCTCCTTTCGCTTCCGATCCATGGAGCTCGACGCCGACAACCTGAGCGCCACCGAGCTCCGCCTCGGCCTGCCTGGGACCAGCAGCAGCAGCAGCGACGACTGGCAGAAGAAGCCGTCGCCCTCCGTCGGGGCCAAGCGCGCTCTGGACGACGGCACCAAGAGCGAGGCCTCGGGGACCAGCCCGGCCGCCAGAGACCTCGACTTCGACCACGACCACGACACCGCCGCGCCTCCCAAGGCGCAAGTGGTCGGGTGGCCGCCGGTGAGGGCGTACAGGAAGAACACCTTCCAGGCGGCGGCGGCGGCCAAGAAGGTCGAGCAGAAGCAGAAGCAGCAGCAGCAGGGAGGCCTGTACGTGAAGGTGAGCATGGACGGCGCGCCGTACCTCAGGAAGGTGGACCTCCGGATGTACAAGGGGTACAGGGAGCTCAGGGAGGCTCTGGACGCGCTCTTCACCAACTCCTTCTCCGCGGCGGCAGAGGGCGGCGGCGACCACCACCAGCACGCCATCGCCTACGAAGACAAGGACGGCGACCTCATGCTCGCCGGAGACGTGCCCTGGGATATGTTCATCTCTTCGTGCAAGAAGCTCAGGATAATGAAGGGCTCTGCCTCTGAGGCCAGGTGATCGCTGATCCATACATAAACAGAGGCTACAGACACGCCACCTGGGAACGCGGATCCAAGAGCACACACGGATCGTACTTGACGAGGAAGGAGGGAGGAGCAGTGTGGCTTGAGCTCTCCAGTGTTGTACAAAGACATGTTTCTTTCTGAACCCAAAAGGGAGAAAGATGTATGAAGCGTGTATATAAGATCTTAGCTAGCAGTTTGTTTTCATTTGTATGAGCGATCGAAGGCTGTAAAAAATGAAAAAGAAAAAAGAAAAGGGAATGAGAAATTGACTAAAGCTGGTCATTTTTCCTCTCCACAGGCTCAACTCTGTATGAGAAAAAAAAGACATTTTTCCGGTCA
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